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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV000272 hCoV-19/bat/Yunnan/RaTG13/2013 EPI_ISL_402131 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2013-07-24 Rhinolophus affinis 29855 2020-01-24 Fecal swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Wuhan Institute of Virology, Chinese Academy of Sciences 44 Xiao Hong Shan, Wuhan, Hubei 430071 Yan Zhu, Ping Yu, Bei Li, Ben Hu, Hao-Rui Si, Xing-Lou Yang, Peng Zhou, Zheng-Li Shi Wuhan Institute of Virology, Chinese Academy of Sciences 29855 100.00
OEAV025691 Coronavirus BtRl-BetaCoV/SC2018 MK211374 RNA viruses Coronavirus BtRl-BetaCoV/SC2018 China 2016-08-01 Rhinolophus 29648 2019-06-30 2591233 Coronavirus BtRl-BetaCoV/SC2018 Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29648 100.00
OEAV025693 Coronavirus BtRs-BetaCoV/YN2018A MK211375 RNA viruses Coronavirus BtRs-BetaCoV/YN2018A China 2016-09-01 Rhinolophus affinis 29698 2019-06-30 2591234 Coronavirus BtRs-BetaCoV/YN2018A Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29698 100.00
OEAV025694 Coronavirus BtRs-BetaCoV/YN2018B MK211376 RNA viruses Coronavirus BtRs-BetaCoV/YN2018B China 2016-09-01 Rhinolophus affinis 30256 2019-06-30 2591235 Coronavirus BtRs-BetaCoV/YN2018B Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 30256 100.00
OEAV025695 Coronavirus BtRs-BetaCoV/YN2018C MK211377 RNA viruses Coronavirus BtRs-BetaCoV/YN2018C China 2016-09-01 Rhinolophus affinis 29689 2019-06-30 2591236 Coronavirus BtRs-BetaCoV/YN2018C Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29689 100.00
OEAV025696 Coronavirus BtRs-BetaCoV/YN2018D MK211378 RNA viruses Coronavirus BtRs-BetaCoV/YN2018D China 2016-09-01 Rhinolophus affinis 30213 2019-06-30 2591237 Coronavirus BtRs-BetaCoV/YN2018D Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 30213 100.00
OEAV025697 Coronavirus BtRt-BetaCoV/GX2018 MK211379 RNA viruses Coronavirus BtRt-BetaCoV/GX2018 China 2016-09-01 Rhinolophus affinis 29752 2019-06-30 2591238 Coronavirus BtRt-BetaCoV/GX2018 Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29748 99.99
OEAV080803 Longquan virus strain Longquan-Rs-32 L protein gene NC_043125 RNA viruses Longquan virus China 2011-01-01 Rhinolophus sinicus 324 2019-06-28 lung 1283294 Longquan loanvirus Loanvirus Hantaviridae NCBI Virus/Genbank Guo,W.-P., Wang,W., Zhou,R.-H., Zhang,Y.-Z. and Lin,X.-D. Zoonoses 324 100.00
OEAV080804 Longquan virus strain Longquan-Rs-32 glycoprotein gene NC_043127 RNA viruses Longquan virus China 2011-01-01 Rhinolophus sinicus 3619 2019-06-28 lung 1283294 Longquan loanvirus Loanvirus Hantaviridae NCBI Virus/Genbank Guo,W.-P., Wang,W., Zhou,R.-H., Zhang,Y.-Z. and Lin,X.-D. Zoonoses 3619 100.00
OEAV115990 Rhinolophus affinis bat coronavirus HKU2-related isolate 160660 MN611522 RNA viruses Rhinolophus affinis bat coronavirus HKU2-related China 2018-03-01 Rhinolophus affinis 26956 2019-12-31 2691595 Rhinolophus affinis bat coronavirus HKU2-related Alphacoronavirus Coronaviridae NCBI Virus/Genbank Li,B., Si,H.R., Zhu,Y., Yang,X.L., Anderson,D.E., Shi,Z.L., Wang,L.F. and Zhou,P. CAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences 26956 100.00
OEAV115994 Rhinolophus affinis polyomavirus 1 PyVB-FN02C DNA LC426678 DNA viruses Rhinolophus affinis polyomavirus 1 China 2016-01-01 Rhinolophus affinis 5097 2019-05-31 2447809 Rhinolophus affinis polyomavirus 1 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5097 100.00
OEAV115997 Rhinolophus affinis polyomavirus 3 PyV19-DXC32 DNA LC426681 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5033 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5033 100.00
OEAV115999 Rhinolophus affinis polyomavirus 3 PyV19-SWAC9 DNA LC426683 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5032 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5032 100.00
OEAV116005 Rhinolophus affinis polyomavirus 4 PyV21-FCC23 DNA LC426703 DNA viruses Rhinolophus affinis polyomavirus 4 China 2016-01-01 Rhinolophus affinis 4983 2019-05-31 2447812 Rhinolophus affinis polyomavirus 4 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 4983 100.00
OEAV116007 Rhinolophus affinis polyomavirus 5 PyV23-DXC17 DNA LC426689 DNA viruses Rhinolophus affinis polyomavirus 5 China 2016-01-01 Rhinolophus affinis 5266 2019-05-31 2447813 Rhinolophus affinis polyomavirus 5 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5266 100.00
OEAV116010 Rhinolophus bat coronavirus HKU32 strain TLC26A MK720945 RNA viruses Rhinolophus bat coronavirus HKU32 China 2015-08-06 Rhinolophus sinicus 29201 2019-06-10 feces 2586419 Rhinolophus bat coronavirus HKU32 Alphacoronavirus Coronaviridae NCBI Virus/Genbank Lau,S.K.P., Wong,A.C.P., Luk,H.K.H., Zhang,L., Li,K.S.M., Ahmed,S.S., Zhao,P.S.H., Cai,J.-P., Kwok,J.S.L., Tsui,S.K.W., Teng,J.L.L. and Woo,P.C.Y. Department of Microbiology, The University of Hong Kong 29201 100.00
OEAV116011 Rhinolophus bat coronavirus HKU32 strain TLC28A MK720946 RNA viruses Rhinolophus bat coronavirus HKU32 China 2015-08-06 Rhinolophus sinicus 29201 2019-06-10 feces 2586419 Rhinolophus bat coronavirus HKU32 Alphacoronavirus Coronaviridae NCBI Virus/Genbank Lau,S.K.P., Wong,A.C.P., Luk,H.K.H., Zhang,L., Li,K.S.M., Ahmed,S.S., Zhao,P.S.H., Cai,J.-P., Kwok,J.S.L., Tsui,S.K.W., Teng,J.L.L. and Woo,P.C.Y. Department of Microbiology, The University of Hong Kong 29201 100.00
OEAV116020 Rhinolophus ferrumequinum polyomavirus 2 PyV13-DZ26C DNA LC426691 DNA viruses Rhinolophus ferrumequinum polyomavirus 2 China 2016-01-01 Rhinolophus ferrumequinum 5194 2019-05-31 2447815 Rhinolophus ferrumequinum polyomavirus 2 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5194 100.00
OEAV116022 Rhinolophus ferrumequinum polyomavirus 3 PyV12-DZ15C DNA LC426693 DNA viruses Rhinolophus ferrumequinum polyomavirus 3 China 2016-01-01 Rhinolophus ferrumequinum 5019 2019-05-31 2447816 Rhinolophus ferrumequinum polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5019 100.00
OEAV116047 Rhinolophus thomasi polyomavirus 1 PyVO-MS02C DNA LC426699 DNA viruses Rhinolophus thomasi polyomavirus 1 China 2016-01-01 Rhinolophus thomasi 5032 2019-05-31 2447822 Rhinolophus thomasi polyomavirus 1 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5032 100.00
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